CDS
| Accession Number | TCMCG066C13902 |
| gbkey | CDS |
| Protein Id | XP_034584795.1 |
| Location | complement(48736159..48737967) |
| Gene | LOC117847658 |
| GeneID | 117847658 |
| Organism | Setaria viridis |
Protein
| Length | 602aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034728904.1 |
| Definition | 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic-like [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | Q |
| Description | Retinal pigment epithelial membrane protein |
| KEGG_TC | - |
| KEGG_Module |
M00372
[VIEW IN KEGG] |
| KEGG_Reaction |
R06952
[VIEW IN KEGG] R06953 [VIEW IN KEGG] R09682 [VIEW IN KEGG] |
| KEGG_rclass |
RC00912
[VIEW IN KEGG] RC01690 [VIEW IN KEGG] |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko00002 [VIEW IN KEGG] ko01000 [VIEW IN KEGG] |
| KEGG_ko |
ko:K09840
[VIEW IN KEGG] |
| EC |
1.13.11.51
[VIEW IN KEGG]
[VIEW IN INGREDIENT] |
| KEGG_Pathway |
ko00906
[VIEW IN KEGG] ko01100 [VIEW IN KEGG] ko01110 [VIEW IN KEGG] map00906 [VIEW IN KEGG] map01100 [VIEW IN KEGG] map01110 [VIEW IN KEGG] |
| GOs | - |
Sequence
| CDS: ATGCAGACTCTCACAGCAAGCTCCCCTGCTTCTACCTCCTCCATACACCGCGGCGGCGGGTCGAGGACTCCGCGCAGCTCGGCGCGGTTCGCGCCCCGGGCCGCGGCGGCCGCGGCCACGAACTCGGTCCTCAGCGCGCCGCCCGCCGTGCGCTACGTTCCGCCTCCGAAGCCCGTACCCAATGCCGCCGCCCCCGCGCCGGCGCGCCGCGGCGACGCGAACCACCACAGGGCGGGCGACGAGAAAGGCTTCAACTTCCTGCAGCGCGCGGCGGCGGCGGCGCTGGACGCGTTCGAGGCCGGCGTCATCACCAACCTCCTCGAGAGGCCGCGCGCGCTGCCGCGGGCGGCGGACCCCGCCGTGCAGATCGCCGGCAACTTCGCGCCGGTCGGGGAGCAGCCGCCCGTGCGTGCGCTCCCGGTCTCCGGACGCATCCCGCCCTTCATCAACGGCGTGTACGCGCGCAACGGCGCCAACCCGTGCTTCGAACCCACCGCCGGGCACCACCTCTTCGACGGCGACGGCATGGTGCACGCCGTCCGCATCCGGAACGGCGCCGCGGAGTCGTACGCTTGCCGGTTCACGGAGACGGCGAGGCTCCGGCAGGAGCGCGCGCTGGGGCGGGCGGTGTTCCCCAAGGCCATCGGCGAGCTCCACGGCCACTCCGGGATCGCCCGCCTCGCCCTCTTCTACGCGCGCGGCCTCTGCGGCCTCGTCGACCCCTCCCACGGCACCGGCGTCGCCAACGCCGGCCTCGTCTACTTCAACGGCCGCCTCCTCGCCATGTCCGAGGACGACCTCCCGTACCAGGTCCGCGTCACCGGCGACGGCGACCTCGAGACGGTCGGGCGGTACGACTTCGACGGCCAGCTCGGGTGCGCCATGATCGCGCACCCCAAGCTCGACCCGGCCTCCGGCGAGCTCTTTGCGCTCAGCTACGACGTGATCAAGCGCCCCTACCTCAAGTACTTCTACTTCCGCCCCGACGGCACCAAGTCCGACGACGTCGAGATCCCGCTCGACCAGCCGACCATGATCCACGACTTCGCCATCACCGAGAACTTCGTCGTGGTCCCCGACCACCAGGTGGTGTTCAAGCTCGGCGAGATGTTCCGCGGCGGTTCACCCGTGGTCCTCGACGGCGAGAAGACCTCCCGCTTCGGCGTGCTGCCCAAGTACGCCGGCGACGCGTCGGAGATGGTGTGGGTGGACGTGCCGGACTGCTTCTGCTTCCACCTCTGGAACGCGTGGGAGGAGCCGGAGTCCGACGAGGTCGTCGTCATCGGCTCCTGCATGACCCCCGCCGACTCCATCTTCAACGACTCCGGCGACGACCGCCTCGAGAGCGTGCTCACTGAGATCCGCCTCAACACCCGCACCGGCGCCTCCACGCGCCGCGCCGTGCTGCCGCCGGCGAGCCAGGTGAACCTGGAGGTGGGCATGGTGAACCGGAACATGCTGGGGAGGAAGACGCGGTACGCGTACCTCGCCGTGGCGGAGCCGTGGCCCAAGGTGTCCGGGTTCGCCAAGGTCGACCTCGCCACCGGCGAGCTCACCAGGTTCGAGTACGGCGAGGGGCGGTTCGGCGGCGAGCCCTGCTTCGTGCCGACCGAGGGCGCGCCGGCGCGCGGCGAGGACGACGGCTACATCCTCTCCCTGGTCCGCGACGAGCGCGCAGGGACGTCGGAGCTCCTGGTGGTGAACGCCGCAGACATGCGGCTCGAGGCCACCGTCCAGCTCCCCTCCCGCGTCCCCTACGGCTTCCATGGCACCTTCATCGGCGCCAAGGAGCTGGAAGCCCAAGCCTGA |
| Protein: MQTLTASSPASTSSIHRGGGSRTPRSSARFAPRAAAAAATNSVLSAPPAVRYVPPPKPVPNAAAPAPARRGDANHHRAGDEKGFNFLQRAAAAALDAFEAGVITNLLERPRALPRAADPAVQIAGNFAPVGEQPPVRALPVSGRIPPFINGVYARNGANPCFEPTAGHHLFDGDGMVHAVRIRNGAAESYACRFTETARLRQERALGRAVFPKAIGELHGHSGIARLALFYARGLCGLVDPSHGTGVANAGLVYFNGRLLAMSEDDLPYQVRVTGDGDLETVGRYDFDGQLGCAMIAHPKLDPASGELFALSYDVIKRPYLKYFYFRPDGTKSDDVEIPLDQPTMIHDFAITENFVVVPDHQVVFKLGEMFRGGSPVVLDGEKTSRFGVLPKYAGDASEMVWVDVPDCFCFHLWNAWEEPESDEVVVIGSCMTPADSIFNDSGDDRLESVLTEIRLNTRTGASTRRAVLPPASQVNLEVGMVNRNMLGRKTRYAYLAVAEPWPKVSGFAKVDLATGELTRFEYGEGRFGGEPCFVPTEGAPARGEDDGYILSLVRDERAGTSELLVVNAADMRLEATVQLPSRVPYGFHGTFIGAKELEAQA |